Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932094.1_cds_XP_016478678.1_70295
CDS Infomation

[gene=LOC107800052] [db_xref=GeneID:107800052] [protein=endoglucanase 16-like] [protein_id=XP_016478678.1] [location=complement(join(9084..9416,9671..9834,9935..10043,10156..10305,10401..10478,10568..10768,10855..11016,16589..16978))] [gbkey=CDS]
Sequence

ATGACGCATGCGCAATATTTGGATTTGCTGGGGCAGTATACTGGTTTCAGACTACAGGGT
GTGGCTACAGTTAGAGGGGGCAGTCGCATTTCTGTGACAGCTATCAGACAACATATGAAG
GTATTGCACCCCGACATTACCGGCGAGACAGAGGATCTCTATATTCACTGGTACACGAGG
TTGGCACTGTTCCTTCTTTTTGGGTGTGTCTTGTTCCCGAACATTTCGGGAAATCTAGTG
AGTCTGCGCTTTCTGCATCATCTGCAGCAGCTAAATGAGTTACCCCAGTATAGCTGGGGT
GCTGTTGTTCTCGCATACATGTACAGGAGTATGTGCCGGGGTAGCATAGTCACCCAGGTG
GACATATGTGATTTTCTATCGCTTCTACAGGCCCTTATGGAGAGGNCAGTAACAACTTTA
GCATGGGCTGCTATCGCGTATCAATCACAGCTCCAAGCTGCTGGAGAATTAAAAAATGTT
CAGTCTGCTATCAAATGGGGCACTGATTATTTCTTGAAAGCCAGTTCTAAGCGTAATCGT
CTCTATGTCCAGGTTGGAGATCCAGTGAAAGATCATGAATGTTGGACAAGGCCAGAAAAC
ATGAAAACGCCGAGAACTGTACTAATGATAGACCAGAATAATCCTGGAACAGAGATTGCA
GCTGAGACTTCTGCAGCAATGGCGGCTGCTTCTGTTGTATTTCGTGGAACCAATCGTACC
TATGCCCGTCAACTTCTCAACAAGGCCAAACTGCTTTTTCAGTTTGCCAAAAGCCATAAA
GGAACTTATGATGGGGAATGCCCTTTCTATTGCTCCTTTTCTGGCTTTCATGATGAGTTG
TTGTGGGCAGCAACATGGCTATATAGAGCAACCAGGAGGCCGACATACTTGGAATTCATA
CAAGAGGAGGCTACTACTGCAACTGTAGCTGAATTTAGTTGGGACCTTAAATATGCTGGA
GCTCAAATACTCCTCTCTAAGTTCTATTTTGAAGGGGAGAAAGATTTACAGAATTTTAAG
CAACAGGCTGATGGTTATATTTGCTCAGTACTTCCACATAGCCCCCATCACCAGGTTTAT
ATATCTCCAGGGGGTCTGCTTCACCTTAGAGATGGAGCTAATACTCAATATGTTACTGCC
ACAGCTTTTCTGTTTAGTGTTTATAGTGATTATCTAGCCAACCATAAGCAAAAGGTCAGC
TGTGGTAACAAACAGTTCAATTCAGCTGATCTCATGGCCTTTGCCAAGCAACAGATGGAC
TATATACTAGGCAAAAACCCAAGAGGAAAATCATACATGGTTGGTTTTGGGAACAAACCT
CCAACTCAAGCTCATCACAGAGGTGCCTCTGTCCCGAAAATGTCTCCAAACAAACTGGTG
GACTGCTCCATGAGTTTTGTGTACTGGTATAACACAGAAAAACCCAATCCTAATGAGCTA
ACAGGCGCCATTGTTGGTGGTCCTGATCGATATGATAACTTTGAAGATCGTCGTTCCACT
TCAGCCATGACTGAGCCAACAACATACACAAATTCTTTGGCCGTTGGTGTCCTTGCAAAG
CTCGCGAAGCACCATGCCCTGTCTTGA

Peptide Sequence

PEP ID

XP_016478678.1
PEP Infomation

PREDICTED: endoglucanase 16-like [Nicotiana tabacum]
Sequence

MTHAQYLDLLGQYTGFRLQGVATVRGGSRISVTAIRQHMKVLHPDITGETEDLYIHWYTR
LALFLLFGCVLFPNISGNLVSLRFLHHLQQLNELPQYSWGAVVLAYMYRSMCRGSIVTQV
DICDFLSLLQALMERXVTTLAWAAIAYQSQLQAAGELKNVQSAIKWGTDYFLKASSKRNR
LYVQVGDPVKDHECWTRPENMKTPRTVLMIDQNNPGTEIAAETSAAMAAASVVFRGTNRT
YARQLLNKAKLLFQFAKSHKGTYDGECPFYCSFSGFHDELLWAATWLYRATRRPTYLEFI
QEEATTATVAEFSWDLKYAGAQILLSKFYFEGEKDLQNFKQQADGYICSVLPHSPHHQVY
ISPGGLLHLRDGANTQYVTATAFLFSVYSDYLANHKQKVSCGNKQFNSADLMAFAKQQMD
YILGKNPRGKSYMVGFGNKPPTQAHHRGASVPKMSPNKLVDCSMSFVYWYNTEKPNPNEL
TGAIVGGPDRYDNFEDRRSTSAMTEPTTYTNSLAVGVLAKLAKHHALS

Transcript Sequence

Gene sequence data has not been registered.